BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009D03SP1|AL426019
(843 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig798 1634 0.0
>3x_Contig798
Length = 3073
Score = 1634 bits (823), Expect = 0.0
Identities = 837/843 (99%)
Strand = Plus / Minus
Query: 1 atcaataatataataaccttttcccattgaatccaaaattccattcacgaggtttccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2106 atcaataatataataaccttttcccattgaatccaaaattccattcacgaggtttccacc 2047
Query: 61 agtccctccccttaatccaacctacatggttatatgataacacagttgaccataatcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2046 agtccctccccttaatccaacctacatggttatatgataacacagttgaccataatcact 1987
Query: 121 agaaaaggtcgggttaccatgtaagtacaggcctatcaaataacacatatattacatacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1986 agaaaaggtcgggttaccatgtaagtacaggcctatcaaataacacatatattacatacc 1927
Query: 181 ctacatgtacccgcttcacagtttgtagtaattcgaaacaactgatccatcccgaacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1926 ctacatgtacccgcttcacagtttgtagtaattcgaaacaactgatccatcccgaacatt 1867
Query: 241 cacgcactgcttagttcttatttacgtttgtgtcgcaaacatgcctcgcgggcatgcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1866 cacgcactgcttagttcttatttacgtttgtgtcgcaaacatgcctcgcgggcatgcctt 1807
Query: 301 gcgtgtgcaccccacgttcttgcttcatcatatttgttgttcttcaggctatttcggttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1806 gcgtgtgcaccccacgttcttgcttcatcatatttgttgttcttcaggctatttcggttc 1747
Query: 361 cttgcattgaactacgggtataacttacagaaaacgacacaaggggggaacacaaacacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1746 cttgcattgaactacgggtataacttacagaaaacgacacaaggggggaacacaaacacg 1687
Query: 421 gaaacgaatcacgtttcttcaatattacgttgggaaaagaatttaccgtagatagaaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1686 gaaacgaatcacgtttcttcaatattacgttgggaaaagaatttaccgtagatagaaaac 1627
Query: 481 aataacagtagaaattgagcaggatgaactcatagagagcagcatggttgcgttgataac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1626 aataacagtagaaattgagcaggatgaactcatagagagcagcatggttgcgttgataac 1567
Query: 541 ttcccgctacgaagacattttacccgtaactctgtgtaccatgtcataaatacagctcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1566 ttcccgctacgaagacattttacccgtaactctgtgtaccatgtcataaatacagctcag 1507
Query: 601 catgtttataatatatatatatwttttttttggtatataatataccccggaagagaacag 660
|||||||||||||||||||||| | | ||| ||||||||||| |||||||||||||||||
Sbjct: 1506 catgtttataatatatatatatatatctttaggtatataataaaccccggaagagaacag 1447
Query: 661 agttggaaacycgggaaataaaacaagtgacctttgattcagtttatttgctctgtatat 720
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1446 agttggaaactcgggaaataaaacaagtgacctttgattcagtttatttgctctgtatat 1387
Query: 721 aacatgatatttatagtagtttttgcttccatggccattctattttagatagagtaacca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1386 aacatgatatttatagtagtttttgcttccatggccattctattttagatagagtaacca 1327
Query: 781 gctgaatccagtgtttatctagctagttgttaaaggaacacggaattttaaaaaaaataa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 gctgaatccagtgtttatctagctagttgttaaaggaacacggaattttaaaaaaaataa 1267
Query: 841 aaa 843
|||
Sbjct: 1266 aaa 1264
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9185
Number of Sequences: 1807
Number of extensions: 9185
Number of successful extensions: 97
Number of sequences better than 1.0e-20: 1
length of query: 843
length of database: 10,358,551
effective HSP length: 16
effective length of query: 827
effective length of database: 10,329,639
effective search space: 8542611453
effective search space used: 8542611453
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)